MARC details
| 000 -LEADER |
|---|
| fixed length control field |
07068cam a22004094i 4500 |
| 005 - DATE AND TIME OF LATEST TRANSACTION |
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| control field |
20221101225946.0 |
| 008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION |
|---|
| fixed length control field |
080807s2004 enka b 001 0 eng d |
| 010 ## - LIBRARY OF CONGRESS CONTROL NUMBER |
|---|
| LC control number |
2004045909 |
| 011 ## - LINKING LIBRARY OF CONGRESS CONTROL NUMBER [OBSOLETE] |
|---|
| Local cataloguing issues note |
BIB MATCHES WORLDCAT |
| 020 ## - INTERNATIONAL STANDARD BOOK NUMBER |
|---|
| International Standard Book Number |
0470849932 |
| Qualifying information |
hbk. (alk. paper) |
| 020 ## - INTERNATIONAL STANDARD BOOK NUMBER |
|---|
| International Standard Book Number |
9780470849934 |
| Qualifying information |
hbk. (alk. paper) |
| 035 ## - SYSTEM CONTROL NUMBER |
|---|
| System control number |
(ATU)b11370804 |
| 035 ## - SYSTEM CONTROL NUMBER |
|---|
| System control number |
(OCoLC)54953050 |
| 040 ## - CATALOGING SOURCE |
|---|
| Original cataloging agency |
DLC |
| Language of cataloging |
eng |
| Description conventions |
rda |
| Transcribing agency |
DLC |
| Modifying agency |
NLM |
| -- |
BAKER |
| -- |
AGL |
| -- |
NLGGC |
| -- |
BTCTA |
| -- |
UBA |
| -- |
YDXCP |
| -- |
STF |
| -- |
ATU |
| 050 00 - LIBRARY OF CONGRESS CALL NUMBER |
|---|
| Classification number |
QP624.5.D726 |
| Item number |
W54 2004 |
| 082 00 - DEWEY DECIMAL CLASSIFICATION NUMBER |
|---|
| Classification number |
629.04 |
| Edition number |
22 |
| 100 1# - MAIN ENTRY--PERSONAL NAME |
|---|
| Personal name |
Wit, Ernst, |
| Relator term |
author. |
| 9 (RLIN) |
1069478 |
| 245 10 - TITLE STATEMENT |
|---|
| Title |
Statistics for microarrays : |
| Remainder of title |
design, analysis, and inference / |
| Statement of responsibility, etc. |
Ernst Wit and John McClure. |
| 264 #1 - PRODUCTION, PUBLICATION, DISTRIBUTION, MANUFACTURE, AND COPYRIGHT NOTICE |
|---|
| Place of production, publication, distribution, manufacture |
Chichester, England ; |
| -- |
Hoboken, NJ, USA : |
| Name of producer, publisher, distributor, manufacturer |
John Wiley & Sons, |
| Date of production, publication, distribution, manufacture, or copyright notice |
[2004] |
| 264 #4 - PRODUCTION, PUBLICATION, DISTRIBUTION, MANUFACTURE, AND COPYRIGHT NOTICE |
|---|
| Date of production, publication, distribution, manufacture, or copyright notice |
©2004 |
| 300 ## - PHYSICAL DESCRIPTION |
|---|
| Extent |
xii, 265 pages : |
| Other physical details |
illustrations ; |
| Dimensions |
24 cm |
| 336 ## - CONTENT TYPE |
|---|
| Content type term |
text |
| Content type code |
txt |
| Source |
rdacontent |
| 337 ## - MEDIA TYPE |
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| Media type term |
unmediated |
| Media type code |
n |
| Source |
rdamedia |
| 338 ## - CARRIER TYPE |
|---|
| Carrier type term |
volume |
| Carrier type code |
nc |
| Source |
rdacarrier |
| 504 ## - BIBLIOGRAPHY, ETC. NOTE |
|---|
| Bibliography, etc. note |
Includes bibliographical references (pages 251-258) and index. |
| 505 00 - FORMATTED CONTENTS NOTE |
|---|
| Miscellaneous information |
1. |
| Title |
Preliminaries -- |
| Miscellaneous information |
1.1. |
| Title |
Using the R Computing Environment -- |
| Miscellaneous information |
1.1.1. |
| Title |
Installing smida -- |
| Miscellaneous information |
1.1.2. |
| Title |
Loading smida -- |
| Miscellaneous information |
1.2. |
| Title |
Data Sets from Biological Experiments -- |
| Miscellaneous information |
1.2.1. |
| Title |
Arabidopsis experiment: Anna Amtmann -- |
| Miscellaneous information |
1.2.2. |
| Title |
Skin cancer experiment: Nighean Barr -- |
| Miscellaneous information |
1.2.3. |
| Title |
Breast cancer experiment: John Bartlett -- |
| Miscellaneous information |
1.2.4. |
| Title |
Mammary gland experiment: Gusterson group -- |
| Miscellaneous information |
1.2.5. |
| Title |
Tuberculosis experiment: BuG@S group -- |
| -- |
I Getting Good Data -- |
| Miscellaneous information |
2. |
| Title |
Set-up of a Microarray Experiment -- |
| Miscellaneous information |
2.1. |
| Title |
Nucleic Acids: DNA and RNA -- |
| Miscellaneous information |
2.2. |
| Title |
Simple cDNA Spotted Microarray Experiment -- |
| Miscellaneous information |
2.2.1. |
| Title |
Growing experimental material -- |
| Miscellaneous information |
2.2.2. |
| Title |
Obtaining RNA -- |
| Miscellaneous information |
2.2.3. |
| Title |
Adding spiking RNA and poly-T primer -- |
| Miscellaneous information |
2.2.4. |
| Title |
Preparing the enzyme environment -- |
| Miscellaneous information |
2.2.5. |
| Title |
Obtaining labelled cDNA -- |
| Miscellaneous information |
2.2.6. |
| Title |
Preparing cDNA mixture for hybridization -- |
| Miscellaneous information |
2.2.7. |
| Title |
Slide hybridization -- |
| Miscellaneous information |
3. |
| Title |
Statistical Design of Microarrays -- |
| Miscellaneous information |
3.1. |
| Title |
Sources of Variation -- |
| Miscellaneous information |
3.2. |
| Title |
Replication -- |
| Miscellaneous information |
3.2.1. |
| Title |
Biological and technical replication -- |
| Miscellaneous information |
3.2.2. |
| Title |
How many replicates? -- |
| Miscellaneous information |
3.2.3. |
| Title |
Pooling samples -- |
| Miscellaneous information |
3.3. |
| Title |
Design Principles -- |
| Miscellaneous information |
3.3.1. |
| Title |
Blocking, crossing and randomization -- |
| Miscellaneous information |
3.3.2. |
| Title |
Design and normalization -- |
| Miscellaneous information |
3.4. |
| Title |
Single-channelMicroarray Design -- |
| Miscellaneous information |
3.4.1. |
| Title |
Design issues -- |
| Miscellaneous information |
3.4.2. |
| Title |
Design layout -- |
| Miscellaneous information |
3.4.3. |
| Title |
Dealing with technical replicates -- |
| Miscellaneous information |
3.5. |
| Title |
Two-channelMicroarray Designs -- |
| Miscellaneous information |
3.5.1. |
| Title |
Optimal design of dual-channel arrays -- |
| Miscellaneous information |
3.5.2. |
| Title |
Several practical two-channel designs -- |
| Miscellaneous information |
4. |
| Title |
Normalization -- |
| Miscellaneous information |
4.1. |
| Title |
Image Analysis -- |
| Miscellaneous information |
4.1.1. |
| Title |
Filtering -- |
| Miscellaneous information |
4.1.2. |
| Title |
Gridding -- |
| Miscellaneous information |
4.1.3. |
| Title |
Segmentation -- |
| Miscellaneous information |
4.1.4. |
| Title |
Quantification -- |
| Miscellaneous information |
4.2. |
| Title |
Introduction to Normalization -- |
| Miscellaneous information |
4.2.1. |
| Title |
Scale of gene expression data -- |
| Miscellaneous information |
4.2.2. |
| Title |
Using control spots for normalization -- |
| Miscellaneous information |
4.2.3. |
| Title |
Missing data -- |
| Miscellaneous information |
4.3. |
| Title |
Normalization for Dual-channel Arrays -- |
| Miscellaneous information |
4.3.1. |
| Title |
Order for the normalizations -- |
| Miscellaneous information |
4.3.2. |
| Title |
Spatial correction -- |
| Miscellaneous information |
4.3.3. |
| Title |
Background correction -- |
| Miscellaneous information |
4.3.4. |
| Title |
Dye effect normalization -- |
| Miscellaneous information |
4.3.5. |
| Title |
Normalization within and across conditions -- |
| Miscellaneous information |
4.4. |
| Title |
Normalization of Single-channel Arrays -- |
| Miscellaneous information |
4.4.1. |
| Title |
Affymetrix data structure -- |
| Miscellaneous information |
4.4.2. |
| Title |
Normalization of Affymetrix data -- |
| Miscellaneous information |
5. |
| Title |
Quality Assessment -- |
| Miscellaneous information |
5.1. |
| Title |
Using MIAME in Quality Assessment -- |
| Miscellaneous information |
5.1.1. |
| Title |
Components of MIAME -- |
| Miscellaneous information |
5.2. |
| Title |
Comparing Multivariate Data -- |
| Miscellaneous information |
5.2.1. |
| Title |
Measurement scale -- |
| Miscellaneous information |
5.2.2. |
| Title |
Dissimilarity and distance measures -- |
| Miscellaneous information |
5.2.3. |
| Title |
Representing multivariate data -- |
| Miscellaneous information |
5.3. |
| Title |
Detecting Data Problems -- |
| Miscellaneous information |
5.3.1. |
| Title |
Clerical errors -- |
| Miscellaneous information |
5.3.2. |
| Title |
Normalization problems -- |
| Miscellaneous information |
5.3.3. |
| Title |
Hybridization problems -- |
| Miscellaneous information |
5.3.4. |
| Title |
Array mishandling -- |
| Miscellaneous information |
5.4. |
| Title |
Consequences of Quality Assessment Checks -- |
| Miscellaneous information |
6. |
| Title |
Microarray Myths: Data -- |
| Miscellaneous information |
6.1. |
| Title |
Design -- |
| Miscellaneous information |
6.1.1. |
| Title |
Single-versus dual-channel designs? -- |
| Miscellaneous information |
6.1.2. |
| Title |
Dye-swap experiments -- |
| Miscellaneous information |
6.2. |
| Title |
Normalization -- |
| Miscellaneous information |
6.2.1. |
| Title |
Myth: 'microarray data is Gaussian' -- |
| Miscellaneous information |
6.2.2. |
| Title |
Myth: 'microarray data is not Gaussian' -- |
| Miscellaneous information |
6.2.3. |
| Title |
Confounding spatial and dye effect -- |
| Miscellaneous information |
6.2.4. |
| Title |
Myth: 'non-negative background subtraction' -- |
| -- |
II Getting Good Answers -- |
| Miscellaneous information |
7. |
| Title |
Microarray Discoveries -- |
| Miscellaneous information |
7.1. |
| Title |
Discovering Sample Classes -- |
| Miscellaneous information |
7.1.1. |
| Title |
Why cluster samples? -- |
| Miscellaneous information |
7.1.2. |
| Title |
Sample dissimilarity measures -- |
| Miscellaneous information |
7.1.3. |
| Title |
Clustering methods for samples -- |
| Miscellaneous information |
7.2. |
| Title |
Exploratory Supervised Learning -- |
| Miscellaneous information |
7.2.1. |
| Title |
Labelled dendrograms -- |
| Miscellaneous information |
7.2.2. |
| Title |
Labelled PAM-type clusterings -- |
| Miscellaneous information |
7.3. |
| Title |
Discovering Gene Clusters -- |
| Miscellaneous information |
7.3.1. |
| Title |
Similarity measures for expression profiles -- |
| Miscellaneous information |
7.3.2. |
| Title |
Gene clustering methods -- |
| Miscellaneous information |
8. |
| Title |
Differential Expression -- |
| Miscellaneous information |
8.1. |
| Title |
Introduction -- |
| Miscellaneous information |
8.1.1. |
| Title |
Classical versus Bayesian hypothesis testing -- |
| Miscellaneous information |
8.1.2. |
| Title |
Multiple testing 'problem' -- |
| Miscellaneous information |
8.2. |
| Title |
Classical Hypothesis Testing -- |
| Miscellaneous information |
8.2.1. |
| Title |
What is a hypothesis test? -- |
| Miscellaneous information |
8.2.2. |
| Title |
Hypothesis tests for two conditions -- |
| Miscellaneous information |
8.2.3. |
| Title |
Decision rules -- |
| Miscellaneous information |
8.2.4. |
| Title |
Results from skin cancer experiment -- |
| Miscellaneous information |
8.3. |
| Title |
Bayesian Hypothesis Testing -- |
| Miscellaneous information |
8.3.1. |
| Title |
A general testing procedure -- |
| Miscellaneous information |
8.3.2. |
| Title |
Bayesian t-test -- |
| Miscellaneous information |
9. |
| Title |
Predicting Outcomes with Gene Expression Profiles -- |
| Miscellaneous information |
9.1. |
| Title |
Introduction -- |
| Miscellaneous information |
9.1.1. |
| Title |
Probabilistic classification theory -- |
| Miscellaneous information |
9.1.2. |
| Title |
Modelling and predicting continuous variables -- |
| Miscellaneous information |
9.2. |
| Title |
Curse of Dimensionality: Gene Filtering -- |
| Miscellaneous information |
9.2.1. |
| Title |
Use only significantly expressed genes -- |
| Miscellaneous information |
9.2.2. |
| Title |
PCA and gene clustering -- |
| Miscellaneous information |
9.2.3. |
| Title |
Penalized methods -- |
| Miscellaneous information |
9.2.4. |
| Title |
Biological selection -- |
| Miscellaneous information |
9.3. |
| Title |
Predicting ClassMemberships -- |
| Miscellaneous information |
9.3.1. |
| Title |
Variance-bias trade-off in prediction -- |
| Miscellaneous information |
9.3.2. |
| Title |
Linear discriminant analysis -- |
| Miscellaneous information |
9.3.3. |
| Title |
k-nearest neighbour classification -- |
| Miscellaneous information |
9.4. |
| Title |
Predicting Continuous Responses -- |
| Miscellaneous information |
9.4.1. |
| Title |
Penalized regression: LASSO -- |
| Miscellaneous information |
9.4.2. |
| Title |
k-nearest neighbour regression -- |
| Miscellaneous information |
10. |
| Title |
Microarray Myths: Inference -- |
| Miscellaneous information |
10.1. |
| Title |
Differential Expression -- |
| Miscellaneous information |
10.1.1. |
| Title |
Myth: 'Bonferroni is too conservative' -- |
| Miscellaneous information |
10.1.2. |
| Title |
FPR and collective multiple testing -- |
| Miscellaneous information |
10.1.3. |
| Title |
Misinterpreting FDR -- |
| Miscellaneous information |
10.2. |
| Title |
Prediction and Learning -- |
| Miscellaneous information |
10.2.1. |
| Title |
Cross-validation. |
| 520 ## - SUMMARY, ETC. |
|---|
| Summary, etc. |
"Interest in microarrays has increased considerably in the last ten years. This increase in the use of microarray technology has led to the need for good standards of microarray experimental notation, data representation, and the introduction of standard experimental controls, as well as standard data normalization and analysis techniques. Statistics for Microarrays: Design, Analysis and Inference is the first book that presents a coherent and systematic overview of statistical methods in all stages in the process of analysing microarray data - from getting good data to obtaining meaningful results."--Publisher's website. |
| 588 ## - SOURCE OF DESCRIPTION NOTE |
|---|
| Source of description note |
Machine converted from AACR2 source record. |
| 650 #0 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name entry element |
DNA microarrays |
| General subdivision |
Statistical methods |
| 9 (RLIN) |
656445 |
| 650 #2 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name entry element |
Oligonucleotide Array Sequence Analysis |
| General subdivision |
methods |
| 9 (RLIN) |
357927 |
| 650 #2 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name entry element |
Statistics as Topic |
| General subdivision |
methods |
| 9 (RLIN) |
359580 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
McClure, John D., |
| Relator term |
author. |
| 9 (RLIN) |
1069479 |
| 907 ## - LOCAL DATA ELEMENT G, LDG (RLIN) |
|---|
| a |
.b11370804 |
| b |
10-05-18 |
| c |
27-10-15 |
| 942 ## - ADDED ENTRY ELEMENTS (KOHA) |
|---|
| Koha item type |
Book |
| 945 ## - LOCAL PROCESSING INFORMATION (OCLC) |
|---|
| a |
629.04 WIT |
| g |
1 |
| i |
A456410B |
| j |
0 |
| l |
cmain |
| o |
- |
| p |
$159.83 |
| q |
- |
| r |
- |
| s |
- |
| t |
0 |
| u |
3 |
| v |
1 |
| w |
0 |
| x |
1 |
| y |
.i12814040 |
| z |
29-10-15 |
| 998 ## - LOCAL CONTROL INFORMATION (RLIN) |
|---|
| -- |
b |
| -- |
c |
| Operator's initials, OID (RLIN) |
23-03-18 |
| Cataloger's initials, CIN (RLIN) |
m |
| First date, FD (RLIN) |
a |
| -- |
eng |
| -- |
enk |
| -- |
0 |
